Whole genome shotgun sequencing library of Wild-caught individual of ... - SRA

SRX5667078: Whole genome shotgun sequencing library of Wild-caught individual of Nothobranchius pienaari, population MZCS34 from DRY climate MZCS34, Pair-end (fwd, rev) 150x2
1 ILLUMINA (HiSeq X Ten) run: 16.6M spots, 4.9G bases, 1.9Gb downloads

Design: Randomly sheared. Library prepared with Truseq-compatible protocols.

Submitted by: Max Planck Institute for Biology of Ageing

Study: De novo assembly of 4 killifish species and resequencing of additional Nothobranchiidae species and populations.

PRJNA531796 • SRP191854 • All experiments • All runs

show Abstracthide Abstract

To uncover the selective forces shaping lifespan evolution, we investigate the genomicbasis underlying adaptations to seasonal habitat desiccation in African killifishes,identifying the genetic variants associated with positive and relaxed purifying selectionin 45 killifish species (4 reference genomes assembled) and 231 wild individuals distributed throughout sub-SaharanAfrica.

Sample: Wild-caught individual of Nothobranchius pienaari, population MZCS34 from DRY climate

SAMN11371327 • SRS4610054 • All experiments • All runs

Organism: Nothobranchius pienaari

Library:

Name: RACDRY_34_NR-34-H_S503_N711_RUN1

Instrument: HiSeq X Ten

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 16.6M spots, 4.9G bases, 1.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR8881090	16,595,948	4.9G	1.9Gb	2019-07-11

ID:: 7637956

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity